dwvisser.analysis
Class Multiplet

java.lang.Object
  |
  +--java.util.AbstractCollection
        |
        +--java.util.AbstractList
              |
              +--java.util.Vector
                    |
                    +--dwvisser.analysis.Multiplet

All Implemented Interfaces:

java.lang.Cloneable, java.util.Collection, java.util.List, java.util.RandomAccess, java.io.Serializable

public class Multiplet

extends java.util.Vector

Version:

Author:

jam

See Also:

Serialized Form

Field Summary

Fields inherited from class java.util.Vector

capacityIncrement, elementCount, elementData

Fields inherited from class java.util.AbstractList

modCount

Constructor Summary

Multiplet()
Creates new Multiplet

Multiplet(Peak p)

Method Summary

void	addMultiplet(Multiplet madd)
void	addPeak(Peak p)
double[]	getAllCentroids()
Peak[]	getAllPeaks()
double[]	getCentroidErrors()
Peak	getPeak(int index)
Peak	getPeakNear(double centroid, double tolerance) Returns peak nearest given centroid if distance is less than the given tolerance.
Multiplet	lastPeaks(int n) Returns a new multiplet containing only the last n peaks of this multiplet.
int	removeAreaGreaterThan(double max) Removes all peaks with greater than the specified area.
int	removeAreaLessThan(double min) Removes all peaks with less than the specified area.

Methods inherited from class java.util.Vector

add, add, addAll, addAll, addElement, capacity, clear, clone, contains, containsAll, copyInto, elementAt, elements, ensureCapacity, equals, firstElement, get, hashCode, indexOf, indexOf, insertElementAt, isEmpty, lastElement, lastIndexOf, lastIndexOf, remove, remove, removeAll, removeAllElements, removeElement, removeElementAt, removeRange, retainAll, set, setElementAt, setSize, size, subList, toArray, toArray, toString, trimToSize

Methods inherited from class java.util.AbstractList

iterator, listIterator, listIterator

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.List

iterator, listIterator, listIterator

Constructor Detail

Multiplet

public Multiplet()

Creates new Multiplet

Multiplet

public Multiplet(Peak p)

Method Detail

getAllPeaks

public Peak[] getAllPeaks()

getAllCentroids

public double[] getAllCentroids()

getCentroidErrors

public double[] getCentroidErrors()

addMultiplet

public void addMultiplet(Multiplet madd)

removeAreaLessThan

public int removeAreaLessThan(double min)

Removes all peaks with less than the specified area.

Parameters:

min - minimum area to retain the peak

Returns:

number of peaks remaining

removeAreaGreaterThan

public int removeAreaGreaterThan(double max)

Removes all peaks with greater than the specified area.

Returns:

number of peaks remaining

getPeakNear

public Peak getPeakNear(double centroid,
                        double tolerance)

Returns peak nearest given centroid if distance is less than the given tolerance.

lastPeaks

public Multiplet lastPeaks(int n)

Returns a new multiplet containing only the last n peaks of this multiplet.

addPeak

public void addPeak(Peak p)

getPeak

public Peak getPeak(int index)